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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
Target of assay
336
transcription factor
89
recombinant protein
83
control
63
RNA binding protein
38
histone
38
histone modification
28
chromatin remodeller
19
broad histone mark
19
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
15
November, 2017
7
November, 2018
6
January, 2019
December, 2018
Available data
28
bam
28
bed narrowPeak
28
bigBed narrowPeak
28
bigWig
28
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
28
Homo sapiens
Biosample type
28
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
20
liver
8
blood
8
bodily fluid
Project
28
AMP
Genome assembly (visualization)
28
hg19
26
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
11
inconsistent control read length
8
inconsistent control run_type
month_released!
December, 2018
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
cell line
HepG2
20
GM12878
8
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