Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
Assay category
25
DNA binding
Target of assay
945
histone modification
944
histone
482
narrow histone mark
461
broad histone mark
446
transcription factor
339
control
94
RNA binding protein
89
recombinant protein
25
chromatin remodeller
5
nucleotide modification
4
other context
4
other post-translational modification
Date released
11
November, 2017
7
November, 2018
January, 2019
3
December, 2017
2
August, 2017
2
December, 2018
Available data
30
bam
30
bed narrowPeak
30
bigWig
30
fastq
28
bigBed narrowPeak
5
bed broadPeak
bigBed broadPeak
Organism
25
Homo sapiens
Biosample type
20
cell line
3
in vitro differentiated cells
2
tissue
Organ
19
liver
4
blood
4
bodily fluid
2
connective tissue
1
epithelium
Project
25
AMP
Genome assembly (visualization)
25
hg19
23
GRCh38
Lab
25
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
12
inconsistent control read length
8
inconsistent control run_type
month_released!
January, 2019
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
25 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
16
GM12878
4
in vitro differentiated cells
adipocyte
2
hepatocyte
1
tissue
liver
2
Download