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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
Assay category
14
DNA binding
Target of assay
874
histone modification
873
histone
450
narrow histone mark
422
broad histone mark
272
control
250
transcription factor
71
RNA binding protein
23
recombinant protein
14
chromatin remodeller
5
nucleotide modification
3
other context
3
other post-translational modification
Date released
November, 2017
6
January, 2019
3
December, 2017
2
December, 2018
2
November, 2018
1
August, 2017
Available data
14
bam
14
bed narrowPeak
14
bigBed narrowPeak
14
bigWig
14
fastq
1
bed broadPeak
1
bigBed broadPeak
Organism
14
Homo sapiens
Biosample type
10
cell line
2
tissue
1
in vitro differentiated cells
1
primary cell
Organ
10
blood
10
bodily fluid
3
liver
1
epithelium
Project
14
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
14
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
inconsistent control read length
4
inconsistent control run_type
month_released!
November, 2017
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
cell line
GM12878
10
tissue
liver
2
in vitro differentiated cells
hepatocyte
1
primary cell
skeletal muscle myoblast
1
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