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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
Assay category
20
DNA binding
Target of assay
852
histone modification
851
histone
445
narrow histone mark
405
broad histone mark
272
control
263
transcription factor
70
RNA binding protein
23
recombinant protein
20
chromatin remodeller
5
nucleotide modification
3
other context
3
other post-translational modification
Date released
November, 2017
7
November, 2018
6
January, 2019
3
December, 2017
2
August, 2017
2
December, 2018
Available data
21
bam
21
bed narrowPeak
21
bigWig
21
fastq
19
bigBed narrowPeak
bed broadPeak
1
bigBed broadPeak
Organism
20
Homo sapiens
Biosample type
15
cell line
3
in vitro differentiated cells
2
tissue
Organ
10
blood
10
bodily fluid
8
liver
2
connective tissue
1
epithelium
Project
20
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
20
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
2
missing controlled_by
Audit category:
7
inconsistent control read length
4
inconsistent control run_type
month_released!
November, 2017
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
cell line
GM12878
10
HepG2
5
in vitro differentiated cells
adipocyte
2
hepatocyte
1
tissue
liver
2
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