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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
Assay category
21
DNA binding
Target of assay
916
histone modification
915
histone
469
narrow histone mark
445
broad histone mark
409
transcription factor
337
control
90
RNA binding protein
89
recombinant protein
21
chromatin remodeller
5
nucleotide modification
4
other context
4
other post-translational modification
Date released
11
November, 2017
5
November, 2018
3
December, 2017
2
August, 2017
Available data
26
bam
26
bed narrowPeak
26
bigWig
26
fastq
24
bigBed narrowPeak
bed broadPeak
5
bigBed broadPeak
Organism
21
Homo sapiens
Biosample type
16
cell line
3
in vitro differentiated cells
2
tissue
Organ
19
liver
blood
10
bodily fluid
2
connective tissue
1
epithelium
Project
21
AMP
Genome assembly (visualization)
21
hg19
19
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
2
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
12
inconsistent control read length
8
inconsistent control run_type
organ_slims!
blood
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
cell line
HepG2
16
in vitro differentiated cells
adipocyte
2
hepatocyte
1
tissue
liver
2
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