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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
Assay category
41
DNA binding
Target of assay
65
histone
65
histone modification
49
transcription factor
36
broad histone mark
29
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
23
August, 2017
14
November, 2017
2
October, 2017
2
October, 2019
Available data
443
bigWig
436
bed narrowPeak
414
bam
276
bigBed narrowPeak
154
fastq
147
tagAlign
41
bed broadPeak
21
bigBed broadPeak
12
bed bed3+
Organism
37
Homo sapiens
Biosample type
20
tissue
12
cell line
9
primary cell
Organ
12
liver
8
musculature of body
8
pancreas
4
brain
2
blood vessel
2
epithelium
2
vasculature
2
vein
Project
41
AMP
Genome assembly (visualization)
41
hg19
26
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
2
inconsistent assembly
BIOSAMPLE
ASSAY
41 results
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ChIP-seq
tissue
skeletal muscle tissue
8
islet of Langerhans
4
pancreas
4
brain
2
cingulate gyrus
1
+ See 1 more…
cell line
HepG2
12
primary cell
skeletal muscle myoblast
7
endothelial cell of umbilical vein
2
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