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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
3
single cell RNA-seq
Assay category
16
DNA binding
3
Transcription
Target of assay
747
histone modification
746
histone
392
narrow histone mark
353
broad histone mark
135
transcription factor
38
RNA binding protein
19
control
6
chromatin remodeller
3
other context
3
other post-translational modification
Date released
5
December, 2017
3
August, 2017
3
July, 2019
3
May, 2021
3
November, 2017
2
September, 2017
Available data
16
bam
13
fastq
10
bigWig
9
bed bed3+
3
tsv
1
tagAlign
Organism
19
Homo sapiens
Biosample type
cell line
10
primary cell
5
in vitro differentiated cells
3
tissue
1
stem cell
Organ
6
brain
2
epithelium
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
embryo
1
liver
Project
19
AMP
Genome assembly (visualization)
19
hg19
12
GRCh38
Lab
16
AMP-T2D consortium
3
Kyle Gaulton, UCSD
biosample_type!
cell line
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
single cell RNA-seq
primary cell
CD8-positive, alpha-beta T cell
3
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
+ See 2 more…
in vitro differentiated cells
Posterior foregut
1
adipocyte
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
islet of Langerhans
2
liver
1
stem cell
hESC
1
See all biosamples
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