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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
3
single cell RNA-seq
Assay category
27
DNA binding
3
Transcription
Target of assay
694
histone modification
693
histone
478
transcription factor
363
narrow histone mark
329
broad histone mark
92
RNA binding protein
85
recombinant protein
35
chromatin remodeller
30
control
5
other context
5
other post-translational modification
Date released
14
November, 2017
5
December, 2017
3
August, 2017
3
July, 2019
3
May, 2021
2
September, 2017
Available data
27
bam
24
fastq
21
bigWig
9
bed bed3+
3
tsv
2
tagAlign
Organism
30
Homo sapiens
Biosample type
13
cell line
8
primary cell
5
in vitro differentiated cells
3
tissue
1
stem cell
Organ
14
liver
6
brain
epithelium
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
embryo
Project
30
AMP
Genome assembly (visualization)
30
hg19
12
GRCh38
Lab
27
AMP-T2D consortium
3
Kyle Gaulton, UCSD
organ_slims!
epithelium
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
single cell RNA-seq
cell line
HepG2
13
primary cell
CD8-positive, alpha-beta T cell
3
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
skeletal muscle myoblast
1
in vitro differentiated cells
Posterior foregut
1
adipocyte
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
islet of Langerhans
2
liver
1
stem cell
hESC
1
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