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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
2
MeRIP-seq
Assay category
58
DNA binding
Target of assay
229
histone
229
histone modification
125
broad histone mark
104
narrow histone mark
60
control
31
transcription factor
19
RNA binding protein
2
nucleotide modification
Date released
21
August, 2017
11
October, 2018
10
April, 2019
7
May, 2019
6
September, 2017
2
June, 2019
2
November, 2020
1
May, 2021
Available data
52
bam
30
fastq
3
tagAlign
2
bed bed3+
Organism
59
Homo sapiens
Biosample type
45
tissue
14
primary cell
cell line
1
in vitro differentiated cells
Organ
48
liver
42
pancreas
35
connective tissue
31
brain
25
epithelium
24
adipose tissue
20
vasculature
19
blood vessel
18
heart
17
limb
11
nerve
9
kidney
8
spleen
7
artery
7
embryo
6
musculature of body
2
vein
1
eye
Project
60
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
58
AMP-T2D consortium
2
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
1
inconsistent ontology term
biosample_type!
cell line
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
13
2
body of pancreas
9
heart left ventricle
6
pancreas
3
right atrium auricular region
3
+ See 5 more…
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
cardiac fibroblast
2
in vitro differentiated cells
pancreatic PP cell
1
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