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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
274
ChIP-seq
2
MeRIP-seq
Assay category
274
DNA binding
Target of assay
593
histone modification
592
histone
309
narrow histone mark
283
broad histone mark
187
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
52
August, 2017
44
October, 2018
43
December, 2017
27
October, 2019
26
May, 2019
23
May, 2020
20
April, 2019
12
November, 2017
10
November, 2018
7
December, 2018
6
September, 2017
3
October, 2017
2
November, 2020
1
January, 2019
Available data
256
bam
146
fastq
88
bigWig
70
bed narrowPeak
65
bigBed narrowPeak
52
tagAlign
16
bed bed3+
Organism
275
Homo sapiens
Biosample type
444
cell line
276
tissue
86
in vitro differentiated cells
45
primary cell
1
stem cell
Organ
85
liver
46
pancreas
41
adipose tissue
41
connective tissue
25
brain
23
heart
19
blood vessel
19
vasculature
17
limb
14
spleen
11
nerve
8
artery
7
kidney
4
musculature of body
Project
276
AMP
Genome assembly (visualization)
91
GRCh38
91
hg19
Lab
274
AMP-T2D consortium
2
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
27
inconsistent control
Audit category:
18
missing controlled_by
BIOSAMPLE
ASSAY
276 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
liver
80
islet of Langerhans
20
2
body of pancreas
18
spleen
14
subcutaneous adipose tissue
12
+ See 39 more…
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