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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
5
MeRIP-seq
Assay category
22
DNA binding
Target of assay
123
histone
123
histone modification
64
narrow histone mark
59
broad histone mark
27
control
24
transcription factor
6
RNA binding protein
5
nucleotide modification
Date released
10
August, 2017
8
May, 2021
5
November, 2020
4
August, 2021
Available data
bam
168
fastq
tagAlign
23
bigWig
9
bed bed3+
3
tsv
Organism
27
Homo sapiens
Biosample type
12
tissue
7
cell line
5
in vitro differentiated cells
3
primary cell
Organ
10
pancreas
4
adipose tissue
4
connective tissue
4
liver
3
epithelium
1
musculature of body
Project
27
AMP
Genome assembly (visualization)
3
hg19
Lab
10
AMP-T2D consortium
8
Kyle Gaulton, UCSD
5
Rohit N. Kulkarni, M.D., Ph.D.
4
Bing Ren, UCSD
Audit category:
3
inconsistent ontology term
files.file_type!
bam
tagAlign
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
5
2
subcutaneous abdominal adipose tissue
4
skeletal muscle tissue
1
cell line
HepG2
4
EndoC_BH1
3
in vitro differentiated cells
embryonic stem cell
5
primary cell
CD8-positive, alpha-beta T cell
3
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