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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
3
MeRIP-seq
Assay category
25
DNA binding
Target of assay
91
histone
91
histone modification
47
narrow histone mark
44
broad histone mark
28
control
7
transcription factor
6
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
12
August, 2017
3
December, 2017
3
November, 2020
3
October, 2019
June, 2019
2
November, 2017
2
November, 2019
1
August, 2021
1
May, 2019
1
May, 2021
Available data
25
bam
17
fastq
2
bigWig
2
tagAlign
Organism
28
Homo sapiens
Biosample type
19
primary cell
5
cell line
4
in vitro differentiated cells
Organ
108
liver
53
pancreas
32
connective tissue
31
brain
28
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
18
heart
17
limb
11
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
4
musculature of body
2
vein
Project
28
AMP
Genome assembly (visualization)
2
hg19
Lab
25
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
8
inconsistent ontology term
month_released!
June, 2019
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
MeRIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
+ See 3 more…
cell line
EndoC_BH1
2
3
in vitro differentiated cells
Hepatic endoderm
2
hepatocyte
1
pancreatic PP cell
1
See all biosamples
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