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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
3
MeRIP-seq
Assay category
24
DNA binding
Target of assay
75
histone
75
histone modification
41
narrow histone mark
34
broad histone mark
27
control
6
transcription factor
5
RNA binding protein
3
nucleotide modification
Date released
12
August, 2017
3
November, 2020
3
October, 2019
2
December, 2017
2
June, 2019
2
November, 2017
2
November, 2019
May, 2019
1
May, 2021
Available data
24
bam
16
fastq
2
bigWig
1
tagAlign
Organism
27
Homo sapiens
Biosample type
19
primary cell
5
cell line
3
in vitro differentiated cells
Organ
liver
52
pancreas
35
connective tissue
29
epithelium
28
brain
24
adipose tissue
16
limb
14
heart
11
kidney
11
nerve
11
vasculature
10
blood vessel
8
spleen
7
artery
7
embryo
6
blood
6
bodily fluid
5
musculature of body
2
vein
1
eye
Project
27
AMP
Genome assembly (visualization)
2
hg19
Lab
24
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
8
inconsistent ontology term
month_released!
May, 2019
organ_slims!
liver
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
MeRIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
2
epithelial cell of proximal tubule
2
brain microvascular endothelial cell
1
+ See 2 more…
cell line
EndoC_BH1
2
3
in vitro differentiated cells
Hepatic endoderm
2
pancreatic PP cell
1
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