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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
3
MeRIP-seq
Assay category
25
DNA binding
Target of assay
83
histone
83
histone modification
45
narrow histone mark
38
broad histone mark
28
control
8
transcription factor
7
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
12
August, 2017
3
December, 2017
3
November, 2020
3
October, 2019
2
June, 2019
2
November, 2017
November, 2019
1
August, 2021
1
May, 2019
1
May, 2021
Available data
25
bam
17
fastq
2
bigWig
2
tagAlign
Organism
28
Homo sapiens
Biosample type
21
primary cell
4
in vitro differentiated cells
3
cell line
Organ
108
liver
51
pancreas
35
connective tissue
31
brain
28
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
28
AMP
Genome assembly (visualization)
2
hg19
Lab
25
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
7
inconsistent ontology term
month_released!
November, 2019
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
MeRIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
2
epithelial cell of proximal tubule
2
brain microvascular endothelial cell
1
+ See 4 more…
in vitro differentiated cells
Hepatic endoderm
2
hepatocyte
1
pancreatic PP cell
1
cell line
EndoC_BH1
3
See all biosamples
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