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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
3
MeRIP-seq
Assay category
22
DNA binding
Target of assay
73
histone
73
histone modification
40
narrow histone mark
33
broad histone mark
25
control
6
transcription factor
5
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
12
August, 2017
3
December, 2017
3
November, 2020
2
November, 2017
November, 2019
2
October, 2019
1
August, 2021
1
June, 2019
1
May, 2021
Available data
22
bam
17
fastq
2
bigWig
2
tagAlign
Organism
25
Homo sapiens
Biosample type
18
primary cell
4
in vitro differentiated cells
3
cell line
Organ
108
liver
51
pancreas
35
connective tissue
31
brain
28
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
25
AMP
Genome assembly (visualization)
2
hg19
Lab
22
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
5
inconsistent ontology term
month_released!
November, 2019
organ_slims!
kidney
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
MeRIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
+ See 2 more…
in vitro differentiated cells
Hepatic endoderm
2
hepatocyte
1
pancreatic PP cell
1
cell line
EndoC_BH1
3
See all biosamples
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