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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
3
single cell RNA-seq
Assay category
14
DNA binding
3
Transcription
Target of assay
794
histone modification
793
histone
447
transcription factor
406
narrow histone mark
386
broad histone mark
99
RNA binding protein
88
recombinant protein
34
chromatin remodeller
12
control
5
other context
5
other post-translational modification
Date released
5
December, 2017
3
July, 2019
3
November, 2018
2
August, 2017
2
November, 2017
2
September, 2017
Available data
17
bam
14
fastq
9
bed bed3+
8
bigWig
5
bed narrowPeak
5
bigBed narrowPeak
3
tsv
1
bed broadPeak
1
bigBed broadPeak
Organism
17
Homo sapiens
Biosample type
6
tissue
5
in vitro differentiated cells
3
primary cell
2
cell line
1
stem cell
Organ
3
brain
3
liver
3
spleen
2
pancreas
1
connective tissue
1
embryo
Project
17
AMP
Genome assembly (visualization)
37
hg19
17
GRCh38
Lab
17
AMP-T2D consortium
month_released!
November, 2019
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
single cell RNA-seq
tissue
spleen
3
islet of Langerhans
2
liver
1
in vitro differentiated cells
Posterior foregut
1
adipocyte
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
primary cell
cerebellar granule cell
2
Purkinje cell
1
cell line
HepG2
2
stem cell
hESC
1
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