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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
3
MeRIP-seq
Assay category
80
DNA binding
Target of assay
360
transcription factor
89
recombinant protein
81
control
64
RNA binding protein
30
chromatin remodeller
28
histone
28
histone modification
15
narrow histone mark
13
broad histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
58
November, 2017
9
October, 2019
4
August, 2021
3
February, 2021
3
January, 2019
3
November, 2018
3
November, 2020
November, 2019
Available data
76
bam
64
fastq
15
bigWig
4
tagAlign
2
bed narrowPeak
2
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
83
Homo sapiens
Biosample type
190
tissue
83
cell line
37
in vitro differentiated cells
35
primary cell
1
stem cell
Organ
62
liver
9
pancreas
6
blood
6
bodily fluid
3
epithelium
3
kidney
2
artery
2
blood vessel
2
heart
2
vasculature
Project
83
AMP
Genome assembly (visualization)
15
hg19
2
GRCh38
Lab
76
AMP-T2D consortium
4
Bing Ren, UCSD
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
month_released!
November, 2019
BIOSAMPLE
ASSAY
83 results
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ChIP-seq
MeRIP-seq
cell line
HepG2
62
GM12878
6
Panc1
6
EndoC_BH1
3
smooth muscle cell of the coronary artery
2
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