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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
3
MeRIP-seq
Assay category
11
DNA binding
Target of assay
31
histone
31
histone modification
17
narrow histone mark
14
broad histone mark
14
control
13
transcription factor
7
recombinant protein
3
RNA binding protein
3
nucleotide modification
Date released
3
June, 2019
3
November, 2020
3
October, 2019
2
December, 2017
2
November, 2019
1
May, 2019
Available data
11
bam
2
fastq
Organism
14
Homo sapiens
Biosample type
8
cell line
4
primary cell
2
in vitro differentiated cells
Organ
9
epithelium
5
kidney
5
pancreas
2
connective tissue
2
embryo
heart
1
musculature of body
Project
14
AMP
Lab
11
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
14
inconsistent ontology term
organ_slims!
heart
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
MeRIP-seq
cell line
EndoC_BH1
2
3
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
primary cell
epithelial cell of proximal tubule
1
kidney epithelial cell
1
mesenchymal stem cell
1
skeletal muscle satellite cell
1
in vitro differentiated cells
Hepatic endoderm
2
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