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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
3
single cell RNA-seq
Assay category
34
DNA binding
3
Transcription
Target of assay
188
histone
188
histone modification
118
narrow histone mark
70
broad histone mark
54
transcription factor
37
control
13
RNA binding protein
10
chromatin remodeller
Date released
15
November, 2017
7
October, 2019
3
January, 2019
3
July, 2019
3
May, 2019
3
November, 2018
3
October, 2017
Available data
36
bam
19
tagAlign
11
fastq
6
bigWig
3
tsv
Organism
37
Homo sapiens
Biosample type
25
tissue
6
cell line
6
primary cell
Organ
108
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
37
AMP
Genome assembly (visualization)
6
hg19
3
GRCh38
Lab
37
AMP-T2D consortium
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
single cell RNA-seq
tissue
brain
3
layer of hippocampus
3
caudate nucleus
2
cerebellum (Hemisphere)
2
cingulate gyrus
2
+ See 10 more…
cell line
GM12878
6
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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