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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
3
single cell RNA-seq
Assay category
34
DNA binding
3
Transcription
Target of assay
220
histone
220
histone modification
130
narrow histone mark
90
broad histone mark
37
control
3
RNA binding protein
3
transcription factor
Date released
15
November, 2017
7
October, 2019
4
May, 2019
3
August, 2017
3
July, 2019
3
October, 2017
2
June, 2019
Available data
33
bam
21
tagAlign
6
bigWig
5
fastq
3
tsv
Organism
37
Homo sapiens
Biosample type
29
tissue
8
primary cell
Organ
108
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
37
AMP
Genome assembly (visualization)
6
hg19
3
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
single cell RNA-seq
tissue
brain
3
layer of hippocampus
3
skeletal muscle tissue
3
caudate nucleus
2
cerebellum (Hemisphere)
2
+ See 12 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
+ See 2 more…
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