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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
3
single cell RNA-seq
Assay category
29
DNA binding
3
Transcription
Target of assay
190
histone
190
histone modification
120
narrow histone mark
70
broad histone mark
32
control
4
RNA binding protein
4
transcription factor
Date released
15
November, 2017
7
October, 2019
3
July, 2019
3
May, 2019
3
October, 2017
1
June, 2019
Available data
31
bam
19
tagAlign
6
bigWig
5
fastq
3
tsv
Organism
32
Homo sapiens
Biosample type
25
tissue
7
primary cell
Organ
108
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
32
AMP
Genome assembly (visualization)
6
hg19
3
GRCh38
Lab
32
AMP-T2D consortium
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
single cell RNA-seq
tissue
brain
3
layer of hippocampus
3
caudate nucleus
2
cerebellum (Hemisphere)
2
cingulate gyrus
2
+ See 10 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
+ See 1 more…
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