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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
5
MeRIP-seq
Assay category
47
DNA binding
Target of assay
150
histone
150
histone modification
78
broad histone mark
72
narrow histone mark
52
control
18
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
21
August, 2017
11
October, 2018
6
October, 2019
6
September, 2017
5
November, 2020
2
November, 2019
1
May, 2019
Available data
41
bam
30
fastq
2
bed bed3+
2
tagAlign
Organism
51
Homo sapiens
Biosample type
29
tissue
12
primary cell
11
cell line
in vitro differentiated cells
Organ
107
liver
52
pancreas
31
brain
27
connective tissue
26
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
52
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
47
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
5
inconsistent ontology term
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
13
2
body of pancreas
9
pancreas
3
endocrine pancreas
2
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
cell line
Panc1
6
EndoC_BH1
2
3
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