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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
5
MeRIP-seq
Assay category
36
DNA binding
Target of assay
93
histone
93
histone modification
51
broad histone mark
42
narrow histone mark
41
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
11
October, 2018
9
August, 2017
6
October, 2019
6
September, 2017
5
November, 2020
2
November, 2019
1
May, 2019
1
May, 2021
Available data
30
bam
18
fastq
3
tagAlign
2
bed bed3+
Organism
40
Homo sapiens
Biosample type
29
tissue
primary cell
11
cell line
1
in vitro differentiated cells
Organ
107
liver
41
pancreas
32
connective tissue
25
brain
24
adipose tissue
18
blood vessel
18
heart
18
vasculature
17
limb
11
nerve
9
artery
9
epithelium
9
kidney
8
spleen
7
embryo
6
blood
6
bodily fluid
4
musculature of body
Project
41
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
36
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
5
inconsistent ontology term
biosample_type!
primary cell
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
13
2
body of pancreas
9
pancreas
3
endocrine pancreas
2
cell line
Panc1
6
EndoC_BH1
2
3
in vitro differentiated cells
pancreatic PP cell
1
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