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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
5
MeRIP-seq
Assay category
42
DNA binding
Target of assay
144
histone
144
histone modification
74
broad histone mark
70
narrow histone mark
47
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
21
August, 2017
11
October, 2018
October, 2019
6
September, 2017
5
November, 2020
2
November, 2019
1
May, 2019
1
May, 2021
Available data
36
bam
30
fastq
3
tagAlign
2
bed bed3+
Organism
46
Homo sapiens
Biosample type
29
tissue
12
primary cell
5
cell line
1
in vitro differentiated cells
Organ
108
liver
47
pancreas
35
connective tissue
27
epithelium
24
adipose tissue
24
brain
20
heart
15
vasculature
14
blood vessel
8
spleen
7
embryo
6
blood
6
bodily fluid
6
kidney
6
musculature of body
4
artery
1
eye
1
limb
Project
47
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
42
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
5
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
47 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
13
2
body of pancreas
9
pancreas
3
endocrine pancreas
2
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
cell line
EndoC_BH1
2
3
in vitro differentiated cells
pancreatic PP cell
1
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