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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
5
MeRIP-seq
Assay category
67
DNA binding
Target of assay
151
histone
151
histone modification
78
broad histone mark
73
narrow histone mark
53
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
28
August, 2017
21
October, 2018
6
October, 2019
6
September, 2017
5
November, 2020
3
November, 2019
2
May, 2021
1
May, 2019
Available data
61
bam
47
fastq
19
bigWig
13
bed narrowPeak
10
bigBed narrowPeak
9
bed bed3+
4
tagAlign
Organism
71
Homo sapiens
Biosample type
46
tissue
12
cell line
12
primary cell
2
in vitro differentiated cells
Organ
446
liver
75
connective tissue
72
pancreas
57
blood
57
bodily fluid
41
adipose tissue
39
epithelium
34
brain
32
heart
31
vasculature
29
blood vessel
22
kidney
17
limb
14
artery
14
spleen
11
nerve
10
embryo
6
musculature of body
2
eye
2
vein
Project
72
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
67
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
Audit category:
6
missing controlled_by
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
20
2
body of pancreas
18
pancreas
4
endocrine pancreas
2
cell line
EndoC_BH1
3
3
Panc1
6
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
in vitro differentiated cells
pancreatic PP cell
2
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