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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
Assay category
40
DNA binding
Target of assay
112
histone
112
histone modification
56
broad histone mark
55
narrow histone mark
49
transcription factor
37
control
11
RNA binding protein
3
chromatin remodeller
Date released
10
August, 2017
9
December, 2017
8
February, 2018
7
August, 2021
6
May, 2021
Available data
33
bam
25
fastq
10
tagAlign
5
bed bed3+
3
bed narrowPeak
3
bigWig
1
bigBed narrowPeak
Organism
40
Homo sapiens
Biosample type
189
tissue
113
cell line
40
in vitro differentiated cells
36
primary cell
1
stem cell
Organ
10
connective tissue
7
embryo
5
epithelium
2
liver
1
pancreas
Project
40
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
35
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
40 results
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ChIP-seq
in vitro differentiated cells
adipocyte
10
neural progenitor cell
7
embryonic stem cell
6
pancreatic endoderm
5
Hepatic endoderm
2
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