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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
3
single cell RNA-seq
Assay category
25
DNA binding
3
Transcription
Target of assay
834
histone modification
833
histone
491
transcription factor
425
narrow histone mark
407
broad histone mark
101
RNA binding protein
88
recombinant protein
36
chromatin remodeller
23
control
5
other context
5
other post-translational modification
Date released
18
November, 2017
3
July, 2019
3
May, 2021
3
November, 2018
1
August, 2017
Available data
311
bam
173
fastq
68
tagAlign
28
bigWig
9
bed bed3+
5
bed narrowPeak
5
bigBed narrowPeak
3
tsv
1
bed broadPeak
1
bigBed broadPeak
Organism
28
Homo sapiens
Biosample type
15
cell line
10
primary cell
3
tissue
Organ
15
liver
6
brain
3
spleen
2
epithelium
2
vasculature
1
blood vessel
Project
28
AMP
Genome assembly (visualization)
28
hg19
8
GRCh38
Lab
25
AMP-T2D consortium
3
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
single cell RNA-seq
cell line
HepG2
15
primary cell
CD8-positive, alpha-beta T cell
3
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
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tissue
spleen
3
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