Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
Assay category
37
DNA binding
Target of assay
302
transcription factor
89
recombinant protein
77
control
52
RNA binding protein
37
histone
37
histone modification
19
broad histone mark
18
narrow histone mark
12
chromatin remodeller
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
15
November, 2017
10
November, 2019
7
October, 2019
3
August, 2021
1
March, 2020
1
May, 2021
Available data
36
bigWig
34
bam
34
bed narrowPeak
19
bigBed narrowPeak
15
fastq
14
bed broadPeak
14
bigBed broadPeak
11
tagAlign
Organism
37
Homo sapiens
Biosample type
627
tissue
236
primary cell
112
in vitro differentiated cells
37
cell line
2
stem cell
Organ
19
pancreas
18
liver
12
epithelium
1
blood
bodily fluid
Project
35
AMP
2
T1D
Genome assembly (visualization)
36
hg19
31
GRCh38
Lab
34
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
12
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
audit.WARNING.category!
inconsistent control run_type
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
37 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
18
EndoC_BH1
12
Panc1
7
Download