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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
163
ChIP-seq
Assay category
163
DNA binding
Target of assay
163
histone
163
histone modification
82
narrow histone mark
81
broad histone mark
34
control
24
transcription factor
6
RNA binding protein
5
nucleotide modification
Date released
96
August, 2017
23
October, 2019
20
May, 2021
13
November, 2017
6
October, 2017
4
August, 2021
1
April, 2019
Available data
603
bigWig
599
bed narrowPeak
bam
344
bigBed narrowPeak
223
tagAlign
156
fastq
49
bed broadPeak
22
bed bed3+
14
bigBed broadPeak
1
tagAlign bed3+
Organism
163
Homo sapiens
Biosample type
127
tissue
primary cell
33
in vitro differentiated cells
3
cell line
Organ
44
connective tissue
31
adipose tissue
23
liver
21
brain
19
musculature of body
14
pancreas
4
gonad
4
ovary
2
eye
1
heart
1
limb
1
lymph node
Project
163
AMP
Genome assembly (visualization)
27
hg19
2
GRCh38
Lab
140
AMP-T2D consortium
20
Kyle Gaulton, UCSD
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
biosample_type!
primary cell
files.file_type!
bam
BIOSAMPLE
ASSAY
163 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
35
subcutaneous abdominal adipose tissue
31
liver
20
skeletal muscle tissue
19
brain
6
+ See 8 more…
in vitro differentiated cells
embryonic stem cell
20
adipocyte
12
neural progenitor cell
1
cell line
HepG2
3
See all biosamples
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