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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
Assay category
93
DNA binding
Target of assay
93
histone
93
histone modification
51
broad histone mark
42
narrow histone mark
41
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
40
August, 2017
30
October, 2018
10
November, 2019
7
October, 2019
3
March, 2020
2
May, 2021
1
May, 2019
Available data
84
bigWig
81
bed narrowPeak
79
bam
49
bigBed narrowPeak
42
fastq
15
tagAlign
12
bed bed3+
12
bed broadPeak
Organism
87
Homo sapiens
Biosample type
73
tissue
primary cell
19
cell line
1
in vitro differentiated cells
Organ
184
brain
99
liver
93
pancreas
70
connective tissue
60
heart
54
blood vessel
54
vasculature
49
limb
32
adipose tissue
27
epithelium
25
musculature of body
24
nerve
20
artery
20
kidney
12
embryo
6
spleen
4
gonad
4
ovary
2
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
89
AMP
4
T1D
Genome assembly (visualization)
84
hg19
78
GRCh38
Lab
93
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
BIOSAMPLE
ASSAY
93 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
30
body of pancreas
17
endocrine pancreas
14
pancreas
12
cell line
EndoC_BH1
12
Panc1
7
in vitro differentiated cells
pancreatic PP cell
1
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