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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
Assay category
47
DNA binding
Target of assay
47
histone
47
histone modification
26
narrow histone mark
21
broad histone mark
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
19
June, 2019
12
August, 2017
10
October, 2019
3
May, 2019
3
November, 2017
Available data
230
bigWig
216
bed narrowPeak
203
bam
98
tagAlign
73
fastq
47
bigBed narrowPeak
16
bed broadPeak
16
bigBed broadPeak
3
bed bed3+
Organism
47
Homo sapiens
Biosample type
312
tissue
47
primary cell
20
cell line
12
in vitro differentiated cells
Organ
17
epithelium
12
vasculature
11
blood vessel
10
vein
8
connective tissue
8
musculature of body
4
kidney
3
brain
2
heart
1
eye
Project
47
AMP
Genome assembly (visualization)
47
GRCh38
47
hg19
Lab
47
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
Audit category:
2
inconsistent assembly
1
inconsistent control read length
1
inconsistent control run_type
BIOSAMPLE
ASSAY
47 results
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ChIP-seq
primary cell
skeletal muscle myoblast
12
endothelial cell of umbilical vein
10
skeletal muscle satellite cell
7
mesenchymal stem cell
6
kidney epithelial cell
3
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