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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
406
ChIP-seq
Assay category
406
DNA binding
Target of assay
407
histone modification
406
histone
207
broad histone mark
199
narrow histone mark
135
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
128
October, 2019
89
May, 2019
72
August, 2017
60
April, 2019
30
October, 2018
14
November, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
486
bigWig
484
bed narrowPeak
465
bam
312
bigBed narrowPeak
tagAlign
73
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
406
Homo sapiens
Biosample type
406
tissue
139
primary cell
86
in vitro differentiated cells
27
cell line
2
stem cell
Organ
85
brain
60
heart
59
pancreas
54
blood vessel
54
vasculature
49
limb
26
connective tissue
25
adipose tissue
25
liver
24
nerve
20
artery
20
kidney
12
musculature of body
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
Project
404
AMP
2
T1D
Genome assembly (visualization)
342
GRCh38
332
hg19
Lab
406
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
406 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
43
heart left ventricle
24
subcutaneous abdominal adipose tissue
24
tibial nerve
24
kidney
20
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