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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
543
ChIP-seq
Assay category
543
DNA binding
Target of assay
544
histone modification
543
histone
294
narrow histone mark
249
broad histone mark
170
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
125
October, 2019
123
August, 2017
83
May, 2019
70
November, 2017
60
April, 2019
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
438
bigWig
436
bed narrowPeak
417
bam
264
bigBed narrowPeak
186
tagAlign
73
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
537
Homo sapiens
Biosample type
543
tissue
237
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
73
pancreas
69
liver
60
heart
54
blood vessel
54
vasculature
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
541
AMP
2
T1D
Genome assembly (visualization)
411
GRCh38
389
hg19
Lab
543
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
limb
BIOSAMPLE
ASSAY
543 results
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Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
50
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
kidney
20
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