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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
Assay category
54
DNA binding
Target of assay
54
histone
54
histone modification
47
transcription factor
30
broad histone mark
24
narrow histone mark
7
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
37
August, 2017
12
November, 2017
3
October, 2017
2
October, 2019
Available data
802
bigWig
786
bed narrowPeak
753
bam
375
bigBed narrowPeak
310
tagAlign
198
fastq
54
bed broadPeak
19
bed bed3+
19
bigBed broadPeak
1
tagAlign bed3+
Organism
48
Homo sapiens
Biosample type
35
tissue
16
primary cell
3
cell line
Organ
13
musculature of body
12
brain
12
pancreas
4
epithelium
4
vasculature
3
blood vessel
3
liver
2
vein
1
adipose tissue
1
connective tissue
Project
54
AMP
Genome assembly (visualization)
54
hg19
31
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
inconsistent control read length
2
inconsistent assembly
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ChIP-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
6
brain
3
cingulate gyrus
2
+ See 4 more…
primary cell
skeletal muscle myoblast
11
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
HepG2
3
See all biosamples
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