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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
Assay category
38
DNA binding
Target of assay
38
histone
38
histone modification
22
narrow histone mark
16
broad histone mark
13
control
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
118
May, 2021
38
August, 2017
32
September, 2018
21
October, 2019
19
June, 2019
3
August, 2021
3
May, 2019
3
November, 2017
Available data
38
bam
38
bigWig
38
fastq
26
bed narrowPeak
12
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
11
tagAlign
Organism
38
Homo sapiens
Biosample type
123
tissue
38
primary cell
37
in vitro differentiated cells
Organ
26
pancreas
14
epithelium
Project
38
AMP
Genome assembly (visualization)
38
GRCh38
38
hg19
Lab
38
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
month_released!
November, 2019
BIOSAMPLE
ASSAY
38 results
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ChIP-seq
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
12
pancreatic alpha cell
7
pancreatic beta cell
7
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