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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
Target of assay
49
transcription factor
28
histone
28
histone modification
14
broad histone mark
14
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
17
November, 2017
11
August, 2017
October, 2019
Available data
664
bigWig
648
bed narrowPeak
611
bam
333
bigBed narrowPeak
281
tagAlign
229
fastq
63
bed broadPeak
28
bigBed broadPeak
25
bed bed3+
Organism
28
Homo sapiens
Biosample type
14
cell line
14
primary cell
Organ
14
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
28
AMP
Genome assembly (visualization)
28
hg19
26
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
11
inconsistent control read length
1
inconsistent assembly
month_released!
October, 2019
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
cell line
HepG2
14
primary cell
skeletal muscle myoblast
11
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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