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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
Assay category
72
DNA binding
Target of assay
72
histone
72
histone modification
40
narrow histone mark
32
broad histone mark
27
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
October, 2019
21
September, 2018
14
August, 2017
14
December, 2017
10
November, 2019
3
August, 2021
3
May, 2019
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
Available data
72
bam
72
bed narrowPeak
72
bigWig
51
fastq
19
bigBed narrowPeak
4
tagAlign
3
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
72
Homo sapiens
Biosample type
45
primary cell
15
in vitro differentiated cells
12
cell line
Organ
144
pancreas
110
brain
97
liver
77
connective tissue
72
epithelium
57
heart
38
vasculature
37
blood vessel
33
musculature of body
32
adipose tissue
22
kidney
12
embryo
6
limb
6
spleen
2
artery
1
blood
1
bodily fluid
1
eye
Project
70
AMP
2
T1D
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
72
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
month_released!
October, 2019
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
13
pancreatic acinar cell
8
pancreatic alpha cell
7
pancreatic beta cell
7
hepatocyte
3
+ See 5 more…
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
12
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