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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
258
ChIP-seq
Assay category
258
DNA binding
Target of assay
259
histone modification
258
histone
146
broad histone mark
111
narrow histone mark
64
control
53
transcription factor
12
RNA binding protein
3
chromatin remodeller
Date released
198
August, 2017
196
October, 2019
140
May, 2021
92
May, 2019
88
November, 2017
60
April, 2019
35
May, 2024
32
September, 2018
31
December, 2017
30
October, 2018
27
May, 2020
20
August, 2021
19
June, 2019
16
February, 2018
12
October, 2017
10
November, 2019
7
January, 2019
3
March, 2020
Available data
182
bigWig
167
bed narrowPeak
161
bam
102
fastq
89
bigBed narrowPeak
74
tagAlign
37
bed broadPeak
12
bed bed3+
11
bigBed broadPeak
Organism
252
Homo sapiens
Biosample type
183
tissue
38
primary cell
37
in vitro differentiated cells
Organ
69
connective tissue
66
pancreas
42
heart
32
adipose tissue
32
liver
19
musculature of body
18
kidney
14
epithelium
Project
258
AMP
Genome assembly (visualization)
182
hg19
161
GRCh38
Lab
258
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
258 results
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Clear Filters
ChIP-seq
tissue
liver
32
subcutaneous abdominal adipose tissue
31
islet of Langerhans
28
heart left ventricle
24
skeletal muscle tissue
19
+ See 5 more…
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
12
pancreatic alpha cell
7
pancreatic beta cell
7
in vitro differentiated cells
adipocyte
37
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