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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
182
ChIP-seq
Assay category
182
DNA binding
Target of assay
183
histone modification
182
histone
104
broad histone mark
77
narrow histone mark
50
control
24
transcription factor
7
RNA binding protein
3
chromatin remodeller
Date released
196
October, 2019
182
August, 2017
140
May, 2021
92
May, 2019
87
November, 2017
60
April, 2019
30
December, 2017
30
October, 2018
27
May, 2020
20
August, 2021
19
June, 2019
16
February, 2018
10
November, 2019
8
October, 2017
7
January, 2019
3
March, 2020
Available data
106
bed narrowPeak
106
bigWig
86
bam
86
fastq
74
tagAlign
37
bed broadPeak
30
bigBed narrowPeak
11
bigBed broadPeak
8
bed bed3+
Organism
176
Homo sapiens
Biosample type
119
tissue
37
in vitro differentiated cells
26
primary cell
Organ
69
connective tissue
50
pancreas
32
adipose tissue
32
liver
19
musculature of body
14
epithelium
Project
182
AMP
Genome assembly (visualization)
106
hg19
86
GRCh38
Lab
182
AMP-T2D consortium
Audit category:
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
182 results
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Clear Filters
ChIP-seq
tissue
liver
32
subcutaneous abdominal adipose tissue
31
islet of Langerhans
24
skeletal muscle tissue
19
pancreas
12
+ See 1 more…
in vitro differentiated cells
adipocyte
37
primary cell
skeletal muscle myoblast
12
pancreatic alpha cell
7
pancreatic beta cell
7
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