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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
ChIP-seq
Assay category
195
DNA binding
Target of assay
196
histone modification
195
histone
107
broad histone mark
87
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
196
October, 2019
195
August, 2017
140
May, 2021
92
May, 2019
88
November, 2017
60
April, 2019
32
September, 2018
31
December, 2017
30
October, 2018
27
May, 2020
20
August, 2021
19
June, 2019
16
February, 2018
12
October, 2017
10
November, 2019
7
January, 2019
3
March, 2020
Available data
119
bigWig
104
bed narrowPeak
99
bam
99
fastq
72
tagAlign
35
bed broadPeak
27
bigBed narrowPeak
12
bed bed3+
10
bigBed broadPeak
Organism
190
Homo sapiens
Biosample type
122
tissue
37
in vitro differentiated cells
36
primary cell
Organ
69
connective tissue
65
pancreas
32
adipose tissue
32
liver
19
musculature of body
14
epithelium
Project
195
AMP
Genome assembly (visualization)
119
hg19
99
GRCh38
Lab
195
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
10
inconsistent control read length
inconsistent assembly
1
inconsistent control run_type
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
195 results
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Clear Filters
ChIP-seq
tissue
liver
32
subcutaneous abdominal adipose tissue
31
islet of Langerhans
28
skeletal muscle tissue
19
pancreas
11
+ See 1 more…
in vitro differentiated cells
adipocyte
37
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
10
pancreatic alpha cell
7
pancreatic beta cell
7
See all biosamples
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