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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
245
ChIP-seq
Assay category
245
DNA binding
Target of assay
196
histone modification
195
histone
107
broad histone mark
87
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
245
August, 2017
235
October, 2019
159
November, 2017
149
May, 2021
115
May, 2019
74
April, 2019
59
October, 2018
52
December, 2017
50
May, 2020
35
May, 2024
32
August, 2021
32
September, 2018
27
June, 2019
24
February, 2018
15
October, 2017
12
November, 2019
11
January, 2019
6
November, 2018
6
September, 2017
5
November, 2020
4
December, 2018
3
February, 2021
3
July, 2019
3
March, 2020
Available data
130
bam
130
fastq
120
bigWig
104
bed narrowPeak
83
tagAlign
35
bed broadPeak
27
bigBed narrowPeak
14
bed bed3+
10
bigBed broadPeak
Organism
239
Homo sapiens
Biosample type
151
tissue
49
primary cell
45
in vitro differentiated cells
Organ
86
pancreas
83
connective tissue
43
liver
38
adipose tissue
26
epithelium
22
musculature of body
Project
245
AMP
Genome assembly (visualization)
122
hg19
101
GRCh38
Lab
245
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
10
inconsistent control read length
inconsistent assembly
1
inconsistent control run_type
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
245 results
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Clear Filters
ChIP-seq
tissue
liver
43
subcutaneous abdominal adipose tissue
36
islet of Langerhans
35
skeletal muscle tissue
22
pancreas
13
+ See 1 more…
primary cell
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
skeletal muscle myoblast
11
in vitro differentiated cells
adipocyte
45
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