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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
161
ChIP-seq
Assay category
161
DNA binding
Target of assay
162
histone modification
161
histone
89
broad histone mark
72
narrow histone mark
42
control
25
transcription factor
4
RNA binding protein
1
chromatin remodeller
Date released
196
October, 2019
161
August, 2017
119
May, 2021
92
May, 2019
88
November, 2017
60
April, 2019
32
September, 2018
30
October, 2018
27
May, 2020
19
June, 2019
12
October, 2017
10
November, 2019
7
December, 2017
7
January, 2019
6
August, 2021
3
March, 2020
Available data
97
bigWig
82
bed narrowPeak
77
bam
77
fastq
62
tagAlign
37
bed broadPeak
30
bigBed narrowPeak
12
bed bed3+
11
bigBed broadPeak
Organism
155
Homo sapiens
Biosample type
123
tissue
38
primary cell
in vitro differentiated cells
Organ
66
pancreas
32
adipose tissue
32
connective tissue
32
liver
19
musculature of body
14
epithelium
Project
161
AMP
Genome assembly (visualization)
97
hg19
77
GRCh38
Lab
161
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
161 results
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ChIP-seq
tissue
liver
32
subcutaneous abdominal adipose tissue
31
islet of Langerhans
28
skeletal muscle tissue
19
pancreas
12
+ See 1 more…
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
12
pancreatic alpha cell
7
pancreatic beta cell
7
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