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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
ChIP-seq
Assay category
125
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
206
August, 2017
196
October, 2019
145
May, 2021
125
November, 2017
97
May, 2019
64
April, 2019
41
October, 2018
40
May, 2024
35
December, 2017
32
September, 2018
27
May, 2020
23
June, 2019
21
August, 2021
21
November, 2018
16
February, 2018
13
January, 2019
12
October, 2017
11
November, 2019
3
March, 2020
2
December, 2018
Available data
112
bam
110
bigWig
109
bed narrowPeak
108
bigBed narrowPeak
67
tagAlign
55
fastq
30
bed broadPeak
24
bigBed broadPeak
1
tar
Organism
125
Homo sapiens
Biosample type
70
tissue
49
cell line
6
primary cell
Organ
76
brain
49
liver
4
epithelium
4
vasculature
2
blood vessel
Project
125
AMP
Genome assembly (visualization)
104
GRCh38
58
hg19
Lab
125
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
16
inconsistent control read length
2
inconsistent control run_type
BIOSAMPLE
ASSAY
125 results
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ChIP-seq
tissue
layer of hippocampus
19
caudate nucleus
13
substantia nigra
13
cingulate gyrus
12
middle frontal area 46
12
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cell line
HepG2
49
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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