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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
572
ChIP-seq
Assay category
572
DNA binding
Target of assay
573
histone modification
572
histone
299
narrow histone mark
273
broad histone mark
181
control
88
transcription factor
22
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
166
October, 2019
123
August, 2017
89
May, 2019
70
November, 2017
42
April, 2019
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
466
bigWig
464
bed narrowPeak
445
bam
294
bigBed narrowPeak
186
tagAlign
73
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
566
Homo sapiens
Biosample type
572
tissue
227
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
73
pancreas
69
liver
60
heart
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
570
AMP
2
T1D
Genome assembly (visualization)
438
GRCh38
417
hg19
Lab
572
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
kidney
BIOSAMPLE
ASSAY
572 results
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Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
51
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
tibial nerve
24
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