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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
Assay category
73
DNA binding
Target of assay
79
transcription factor
74
histone modification
73
histone
67
control
45
broad histone mark
28
narrow histone mark
15
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
39
August, 2017
16
October, 2018
7
October, 2017
6
January, 2019
5
December, 2017
Available data
501
bigWig
499
bed narrowPeak
445
bam
294
bigBed narrowPeak
186
tagAlign
73
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
67
Homo sapiens
Biosample type
73
primary cell
73
tissue
65
in vitro differentiated cells
16
cell line
2
stem cell
Organ
42
pancreas
17
liver
7
brain
6
spleen
1
adipose tissue
1
connective tissue
Project
73
AMP
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
73
AMP-T2D consortium
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
kidney
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
tissue
body of pancreas
16
islet of Langerhans
14
liver
12
pancreas
12
brain
7
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