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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
565
ChIP-seq
Assay category
565
DNA binding
Target of assay
566
histone modification
565
histone
299
narrow histone mark
266
broad histone mark
171
control
88
transcription factor
24
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
166
October, 2019
123
August, 2017
89
May, 2019
70
November, 2017
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
459
bigWig
457
bed narrowPeak
404
bam
253
bigBed narrowPeak
186
tagAlign
73
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
559
Homo sapiens
Biosample type
565
tissue
227
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
73
pancreas
69
liver
54
blood vessel
54
vasculature
53
heart
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
6
spleen
4
gonad
4
ovary
2
eye
kidney
1
lymph node
1
pituitary gland
Project
563
AMP
2
T1D
Genome assembly (visualization)
432
GRCh38
375
hg19
Lab
530
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
kidney
month_released!
April, 2019
BIOSAMPLE
ASSAY
565 results
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Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
51
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
tibial nerve
24
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