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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
136
ChIP-seq
Assay category
136
DNA binding
Target of assay
136
histone
136
histone modification
70
broad histone mark
66
narrow histone mark
50
control
18
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
52
August, 2017
32
September, 2018
30
October, 2018
10
November, 2019
7
October, 2019
3
March, 2020
1
May, 2019
1
May, 2021
Available data
142
bigWig
137
bam
127
bed narrowPeak
100
fastq
49
bigBed narrowPeak
tagAlign
12
bed bed3+
12
bed broadPeak
Organism
136
Homo sapiens
Biosample type
59
tissue
58
primary cell
19
cell line
Organ
136
pancreas
97
heart
89
epithelium
88
brain
71
vasculature
70
blood vessel
59
connective tissue
49
limb
44
liver
kidney
25
adipose tissue
24
nerve
20
artery
20
musculature of body
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
Project
132
AMP
4
T1D
Genome assembly (visualization)
129
GRCh38
129
hg19
Lab
136
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
Audit category:
48
missing controlled_by
Audit category:
9
inconsistent control read length
organ_slims!
kidney
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
136 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
22
body of pancreas
17
endocrine pancreas
14
pancreas
6
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
pancreatic alpha cell
7
pancreatic beta cell
7
cell line
EndoC_BH1
12
Panc1
7
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