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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
Assay category
94
DNA binding
Target of assay
94
histone
94
histone modification
60
transcription factor
50
narrow histone mark
44
broad histone mark
36
control
18
RNA binding protein
11
chromatin remodeller
3
nucleotide modification
Date released
21
October, 2019
21
September, 2018
14
August, 2017
14
December, 2017
10
November, 2019
3
August, 2021
3
May, 2019
2
June, 2019
2
May, 2021
2
November, 2017
1
January, 2019
1
March, 2020
Available data
94
bam
91
bigWig
89
bed narrowPeak
52
fastq
30
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
3
bed bed3+
Organism
94
Homo sapiens
Biosample type
66
primary cell
15
in vitro differentiated cells
13
cell line
Organ
187
brain
151
pancreas
102
liver
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
62
heart
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
92
AMP
2
T1D
Genome assembly (visualization)
91
hg19
89
GRCh38
Lab
94
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
BIOSAMPLE
ASSAY
94 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
15
pancreatic ductal cell
13
pancreatic acinar cell
8
epithelial cell of proximal tubule
7
pancreatic alpha cell
7
+ See 6 more…
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
12
GM12878
1
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