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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
Assay category
88
DNA binding
Target of assay
294
transcription factor
108
control
89
histone modification
88
histone
82
recombinant protein
54
RNA binding protein
54
narrow histone mark
34
broad histone mark
19
chromatin remodeller
1
other context
1
other post-translational modification
Date released
32
August, 2017
27
May, 2020
17
December, 2017
6
August, 2021
5
October, 2019
1
November, 2017
Available data
82
bigWig
80
bed narrowPeak
79
bam
58
tagAlign
44
fastq
35
bigBed narrowPeak
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
88
Homo sapiens
Biosample type
69
tissue
12
in vitro differentiated cells
4
cell line
3
primary cell
Organ
175
brain
139
pancreas
89
epithelium
88
liver
77
connective tissue
67
blood vessel
67
vasculature
62
heart
49
limb
31
adipose tissue
30
kidney
24
nerve
20
artery
20
musculature of body
13
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
88
AMP
Genome assembly (visualization)
68
hg19
57
GRCh38
Lab
85
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
88 results
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Clear Filters
ChIP-seq
tissue
liver
64
right lobe of liver
5
in vitro differentiated cells
hepatocyte
12
cell line
HepG2
4
primary cell
hepatocyte
3
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