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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
Assay category
80
DNA binding
Target of assay
78
histone
78
histone modification
44
broad histone mark
40
transcription factor
35
control
33
narrow histone mark
10
RNA binding protein
2
chromatin remodeller
Date released
71
August, 2017
8
June, 2019
1
October, 2019
Available data
37
bed narrowPeak
37
bigWig
36
bam
28
fastq
19
tagAlign
9
bigBed narrowPeak
1
bed broadPeak
Organism
80
Homo sapiens
Biosample type
39
in vitro differentiated cells
33
tissue
8
primary cell
Organ
187
brain
151
pancreas
125
liver
94
epithelium
80
connective tissue
71
vasculature
70
blood vessel
62
heart
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
11
blood
11
bodily fluid
6
spleen
4
gonad
4
ovary
3
eye
1
lymph node
1
pituitary gland
Project
80
AMP
Genome assembly (visualization)
37
hg19
36
GRCh38
Lab
80
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
80 results
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ChIP-seq
in vitro differentiated cells
adipocyte
39
tissue
subcutaneous abdominal adipose tissue
31
adipose tissue
1
islet of Langerhans
1
primary cell
mesenchymal stem cell
6
cardiac fibroblast
2
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